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System Requirements

FARCI is originally written in MATLAB. The subroutines in FARCI (version 1.0.0) have been successfully tested on MATLAB 2017b, 2018b and 2020b.

Last Update


Current version: FARCI v1.0.0 (04/17/2020)


FARCI utilizes Suite2P and OASIS for deconvolution of calcium imaging data. Please download both packages from below links and add them to farci/subfunctions folder.



Download and Installation


Download and unzip the FARCI for codes and data.

Download datasets generated using NAOMi from here.



Redistribution and use in source and binary forms, with or without modification, are permitted provided agreeing to the BSD 3-Clause Style License.

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